Misumi offers specific lengths of wire (100 mm increments) with nylon connectors already fitted both ends, or wires already stripped on one end.
E.G, with JST SM connector: https://us.misumi-ec.com/vona2/detail/110500045910/?Inch=0
Now, it's not the best solution, because it doesn't seem you can mix and match the nylon connector styles (edit: correction -- it seems they do offer the service, but I have not explored that yet), but it can definitely save a lot of time and labour, leaving you and your crew to add connectors to steppers, and terminate the cable as you need it (or just specify a connector with a suitable pitch to plug into duet boards, though they do not seem to have the exact appropriate connector.)
One nice thing, is that they do seem to offer the connectors needed to plug directly into stepper motors with the small nylon connector right on the body. I forget which it is, but I think I verified this previously.